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1.
Harmful Algae ; 134: 102603, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38705609

RESUMEN

Toxic dinoflagellate Alexandrium can produce saxitoxins (STXs) and cause paralytic shellfish poisoning (PSP), and thus they are monitored for environmental safety management. Microscopic discrimination of dinoflagellates is difficult to distinguish between toxic and non-toxic species due to their similar morphology. Meanwhile, an alternative quantitative PCR (qPCR) assay is sensitive, rapid, and cost-effective for harmful species monitoring. Herein, we developed a novel qPCR assay to detect the STXs biosynthesis gene sxtB of Alexandrium catenella and A. pacificum, the leading cause of PSP outbreaks in Asian coasts and worldwide. The newly designed sxtB TaqMan probes target the species without any positive signal in other relative dinoflagellates. Deming regression analysis revealed that the sxtB copy number of A. catenella and A. pacificum was 3.6 and 4.1 copies per cell, respectively. During the blooming periods (April 13th-14th, 2020), only A. catenella cells were detected through the qPCR assay, ranging from 5.0 × 10 to 2.5 × 104 eq cells L-1. In addition, sxtB qPCR quantified more accurately compared to large subunit (LSU) rRNA targeting qPCR assay that overestimate cell density. Besides, the sensitivity of sxtB was higher compared to the microscope when the species were rarely present (5.0 × 102 cells L-1). These suggest that the sxtB qPCR assay can be applied to toxic Alexandrium monitoring in the Korean coast, even in the early stage of bloomings.


Asunto(s)
Dinoflagelados , Reacción en Cadena en Tiempo Real de la Polimerasa , Saxitoxina , Dinoflagelados/genética , Saxitoxina/genética , Saxitoxina/biosíntesis , República de Corea , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Floraciones de Algas Nocivas
2.
J Mater Chem B ; 12(15): 3751-3763, 2024 Apr 17.
Artículo en Inglés | MEDLINE | ID: mdl-38532694

RESUMEN

In this study, a one-step immunoassay for porcine epidemic diarrhea virus (PEDV) based on Fv-antibodies and switching peptides was developed, and the assay results of PEDV were obtained by just mixing samples without any further reaction or washing steps. The Fv-antibodies with binding affinity to the spike protein of PEDV were screened from the Fv-antibody library using the receptor-binding domain (RBD) of the spike protein as a screening probe. Screened Fv-antibodies with binding affinities to the RBD antigen were expressed, and the binding constants (KD) were calculated to be 83-142 nM. The one-step immunoassay for the detection of PEDV was configured as a displacement immunoassay using a fluorescence-labeled switching peptide. The one-step immunoassay based on switching peptides was performed using PEDV, and the limit of detection (LOD) values for PEDV detection were estimated to be Ct = 39.7-36.4. Compared with the LOD value for a conventional lateral flow immunoassay (Ct = 33.0), the one-step immunoassay showed a remarkably improved LOD for the detection of PEDV. Finally, the interaction between the screened Fv-antibodies and the PEDV RBD was investigated using docking simulations and compared with the amino acid sequences of the receptors on host cells, such as aminopeptidase N (APN) and angiotensin-converting enzyme-2 (ACE-2).


Asunto(s)
Virus de la Diarrea Epidémica Porcina , Animales , Porcinos , Virus de la Diarrea Epidémica Porcina/metabolismo , Glicoproteína de la Espiga del Coronavirus , Inmunoensayo/métodos , Péptidos , Anticuerpos Antivirales
3.
Mar Pollut Bull ; 200: 116048, 2024 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-38271916

RESUMEN

We employed a detection method to quantify Alexandrium catenella (Group I), one of the causative species for paralytic shellfish poisoning (PSP) in Jinhae-Masan Bay, Korea, targets sxtA4, via chip-based digital PCR. Additionally, we explored the dynamics of Alexandrium during the spring of 2022 using an rDNA-based quantitative PCR (qPCR) assay to enhance the performance of the dPCR assay. In matching dPCR results with PSP monitoring reports, we optimized a cell regulatory threshold of 102 cells L-1, the maximum cell density when shellfish harvesting was permitted, for the dPCR assay. This threshold functioned similar to the PST threshold used in mouse bioassays (MBAs). Furthermore, we validated a total concordance rate of 83.8 % between the two assays for 2020-2022, reaching a maximum of 96.2 % in 2020. Thus, the result of dPCR could complement MBAs, facilitating the early detection of PSP outbreaks.


Asunto(s)
Dinoflagelados , Intoxicación por Mariscos , Toxinas Biológicas , Animales , Ratones , Bahías , Dinoflagelados/genética , Saxitoxina , Reacción en Cadena de la Polimerasa , Mariscos , República de Corea
4.
Sci Total Environ ; 905: 166914, 2023 Dec 20.
Artículo en Inglés | MEDLINE | ID: mdl-37689198

RESUMEN

In this study, we investigated the occurrence and distribution of phenolic compounds, including phenol, cresols, chlorophenols, nitrophenol, and bromophenols, in freshwater environments. We also focused on phenolic compounds in crucian carp (Carassius auratus) tissues, specifically the muscle, gills, brain, blood, liver, and gonads, to assess their potential bioaccumulation in fish and human health risks. Phenolic compounds were found to be widespread in various freshwater environments throughout South Korea. Phenol was predominant in all matrices, with median concentrations of 57.0 ng/L in freshwater, 54.3 ng/g dry weight (dw) in sediment, and ranging from 71 ng/g wet weight (ww) to 621 ng/g ww in crucian carp tissues. Cresols were the second most dominant compound, with m-cresol exhibiting the highest prevalence. Most of the compounds detected in crucian carp samples were also detected in freshwater and sediment, whereas pentachlorophenol and 2,4,6-tribromophenol were exclusively detected in crucian carp tissues. A high bioaccumulation potential in the liver was observed for most phenolic compounds [median log bioconcentration factor (BCF): 3.2-3.7]. Interestingly, only m-cresol showed high bioaccumulation potential in the gills (median log BCF: 3.1). The estimated daily intake of phenolic compounds suggested that it does not pose an immediate concern for human exposure owing to crucian carp consumption. These findings enhance our understanding of the exposure status, distribution, and bioaccumulation potency of phenolic compounds in aquatic ecosystems and emphasize the importance of ongoing monitoring and risk assessment efforts.


Asunto(s)
Carpas , Contaminantes Químicos del Agua , Animales , Humanos , Ecosistema , Cresoles , Agua Dulce , Fenoles , Fenol , República de Corea , Contaminantes Químicos del Agua/análisis
5.
Artif Intell Med ; 142: 102570, 2023 08.
Artículo en Inglés | MEDLINE | ID: mdl-37316094

RESUMEN

This paper presents ArrhyMon, a self-attention-based LSTM-FCN model for arrhythmia classification from ECG signal inputs. ArrhyMon targets to detect and classify six different types of arrhythmia apart from normal ECG patterns. To the best of our knowledge, ArrhyMon is the first end-to-end classification model that successfully targets the classification of six detailed arrhythmia types and compared to previous work does not require additional preprocessing and/or feature extraction operations separate from the classification model. ArrhyMon's deep learning model is designed to capture and exploit both global and local features embedded in ECG sequences by integrating fully convolutional network (FCN) layers and a self-attention-based long and short-term memory (LSTM) architecture. Moreover, to enhance its practicality, ArrhyMon incorporates a deep ensemble-based uncertainty model that generates a confidence-level measure for each classification result. We evaluate ArrhyMon's effectiveness using three publicly available arrhythmia datasets (i.e., MIT-BIH, Physionet Cardiology Challenge 2017 and 2020/2021) to show that ArrhyMon achieves state-of-the-art classification performance (average accuracy 99.63%), and that confidence measures show close correlation with subjective diagnosis made from practitioners.


Asunto(s)
Arritmias Cardíacas , Humanos , Incertidumbre , Arritmias Cardíacas/diagnóstico
6.
Mar Pollut Bull ; 189: 114741, 2023 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-36870136

RESUMEN

Studies on distribution of microplastics (MPs) in sediments of tidal flats are relatively scarce compared to other coastal areas. In this study, spatial and vertical distributions and compositions of MPs in tidal flat sediments along the west coast of Korea were investigated. The abundance of MPs in surface and core sediments ranged from 20 to 325 and 14 to 483 particles per 50 g dry weight, respectively. Polypropylene (51%) and polyethylene (36%) were the most dominant MPs; the size was <0.3 mm, and the shape was mostly fragments followed by fibers. The abundance of MPs in sediments has increased rapidly since the 1970s, and recently showed a slight decrease. Surface morphology of MPs analyzed using a scanning electron microscope revealed that the MPs in tidal flats were highly weathered mechanically and/or oxidatively. The results of this study provide valid baseline data on distributions of MPs in tidal flats.


Asunto(s)
Microplásticos , Contaminantes Químicos del Agua , Plásticos , Sedimentos Geológicos , Contaminantes Químicos del Agua/análisis , Monitoreo del Ambiente , República de Corea
7.
Microorganisms ; 10(7)2022 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-35889179

RESUMEN

Biomonitoring of dinoflagellate communities in marine ecosystems is essential for efficient water quality management and limiting ecosystem disturbances. Current identification and monitoring of toxic dinoflagellates, which cause harmful algal blooms, primarily involves light or scanning electron microscopy; however, these techniques are limited in their ability to monitor dinoflagellates and plankton, leaving an incomplete analysis. In this study, we analyzed the species composition and seasonal distribution of the dinoflagellate communities in four Korean coastal regions using 18S rRNA amplicon sequencing. The results showed significantly high diversity in the dinoflagellate communities in all regions and seasons. Furthermore, we found seasonally dominant species and causative species of harmful algal blooms (Cochlodinium sp., Alexandrium sp., Dinophysis sp., and Gymnodinium sp.). Moreover, dominant species were classified by region and season according to the difference in geographical and environmental parameters. The molecular analysis of the dinoflagellate community based on metagenomics revealed more diverse species compositions that could not be identified by microscopy and revealed potentially harmful or recently introduced dinoflagellate species. In conclusion, metagenomic analysis of dinoflagellate communities was more precise and obtained results faster than microscopic analysis, and could improve the existing monitoring techniques for community analysis.

8.
Virol J ; 19(1): 112, 2022 06 27.
Artículo en Inglés | MEDLINE | ID: mdl-35761402

RESUMEN

BACKGROUND: Middle East respiratory syndrome coronavirus (MERS-CoV) causes severe respiratory disease in humans, with a case fatality rate of approximately 35%, thus posing a considerable threat to public health. The lack of approved vaccines or antivirals currently constitutes a barrier in controlling disease outbreaks and spread. METHODS: In this study, using a mammalian expression system, which is advantageous for maintaining correct protein glycosylation patterns, we constructed chimeric MERS-CoV virus-like particles (VLPs) and determined their immunogenicity and protective efficacy in mice. RESULTS: Western blot and cryo-electron microscopy analyses demonstrated that MERS-CoV VLPs were efficiently produced in cells co-transfected with MERS-CoV spike (S), envelope, membrane and murine hepatitis virus nucleocapsid genes. We examined their ability as a vaccine in a human dipeptidyl peptidase 4 knock-in C57BL/6 congenic mouse model. Mice immunized with MERS VLPs produced S-specific antibodies with virus neutralization activity. Furthermore, MERS-CoV VLP immunization provided complete protection against a lethal challenge with mouse-adapted MERS-CoV and improved virus clearance in the lung. CONCLUSIONS: Overall, these data demonstrate that MERS-CoV VLPs have excellent immunogenicity and represent a promising vaccine candidate.


Asunto(s)
Infecciones por Coronavirus , Coronavirus del Síndrome Respiratorio de Oriente Medio , Vacunas de Partículas Similares a Virus , Vacunas Virales , Animales , Anticuerpos Neutralizantes , Anticuerpos Antivirales , Microscopía por Crioelectrón , Mamíferos , Ratones , Ratones Endogámicos C57BL , Coronavirus del Síndrome Respiratorio de Oriente Medio/genética , Glicoproteína de la Espiga del Coronavirus/genética , Vacunas de Partículas Similares a Virus/genética , Vacunas Virales/genética
9.
Viruses ; 14(5)2022 05 15.
Artículo en Inglés | MEDLINE | ID: mdl-35632790

RESUMEN

In this study, we investigated the correlation between the mechanism involved in porcine epidemic diarrhea virus (PEDV) replication and autophagic flux. In this study, we found that as PEDV replicated, production of LC3-II was significantly induced up to 24 h post-infection (hpi). Interestingly, although there was significant production of LC3-II, greater p62 accumulation was simultaneously found. Pretreatment with rapamycin significantly induced PEDV replication, but autolysosome formation was reduced. These results were confirmed by the evaluation of ATG5/ATG12 and LAMP1/LAMP2. Taken together, we conclude that PEDV infection induces autophagosome formation but inhibits autolysosome formation during replication.


Asunto(s)
Autofagosomas/metabolismo , Virus de la Diarrea Epidémica Porcina , Animales , Autofagosomas/genética , Chlorocebus aethiops , Lisosomas/genética , Lisosomas/metabolismo , Macroautofagia , Virus de la Diarrea Epidémica Porcina/inmunología , Porcinos , Células Vero
10.
Toxins (Basel) ; 14(2)2022 02 02.
Artículo en Inglés | MEDLINE | ID: mdl-35202138

RESUMEN

Alexandrium pacificum, which produces the paralytic shellfish toxin (PST) saxitoxin (STX), is one of the causative species of paralytic shellfish poisoning outbreaks in coastal areas of Korea. In this study, we developed a chip-based digital PCR (dPCR) method for A. pacificum detection and tested it for monitoring in Jinhae-Masan Bay. Using the sequence of an A. pacificum strain isolated in 2017, species-specific primers targeting sxtA4 (a STX biosynthesis-related gene) were designed and used in a dPCR, detecting 2.0 ± 0.24 gene copies per cell of A. pacificum. Cell abundance in field samples, estimated by a chip-based dPCR, was compared with the PST content, and measured using a mouse bioassay. A comparison with shellfish PST concentrations indicated that cell concentrations above 500 cells L-1, as measured using the dPCR assay, may cause shellfish PST concentrations to exceed the allowed limits for PSTs. Concordance rates between dPCR and PST results were 62.5% overall in 2018-2021, reaching a maximum of 91.7% in 2018-2019. The sensitivity of the dPCR assay was higher than that of microscopy and sxtA4-based qPCRs. Absolute quantification by chip-based dPCRs targeting sxtA4 in A. pacificum exhibits potential as a complementary approach to mouse bioassay PST monitoring for the prevention of toxic blooms.


Asunto(s)
Dinoflagelados , Saxitoxina/análisis , Dinoflagelados/genética , Dosificación de Gen , Reacción en Cadena de la Polimerasa/métodos , Saxitoxina/genética
11.
Materials (Basel) ; 15(1)2022 Jan 04.
Artículo en Inglés | MEDLINE | ID: mdl-35009493

RESUMEN

The scission rates of polystyrene and fluorinated polystyrene irradiated in an irradiation facility with Co-60 γ-rays were determined using molecular dynamics simulation and gel permeation chromatography (GPC) molecular weight distributions. The prediction was based on the assumption that γ-ray energy is transferred to the initial velocity of the primary knock-on atom. We employed a molecular dynamics simulation procedure to compute the changes in bond length between the connections for selected values of the absorbed dose and compared the calculated values with measurements made on the irradiated samples. The samples were exposed to four different absorbed doses of 25, 50, 75, and 100 kGy. The scission process and scission ratio were simulated with LAMMPS with ReaxFF potential for each bond, and we compared the simulation results with the experimental data especially measuring average molecular weight to evaluate the effect of fluorination on radiation enhancement.

12.
PLoS One ; 16(12): e0261433, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34972151

RESUMEN

Diagnostic tests for hearing impairment not only determines the presence (or absence) of hearing loss, but also evaluates its degree and type, and provides physicians with essential data for future treatment and rehabilitation. Therefore, accurately measuring hearing loss conditions is very important for proper patient understanding and treatment. In current-day practice, to quantify the level of hearing loss, physicians exploit specialized test scores such as the pure-tone audiometry (PTA) thresholds and speech discrimination scores (SDS) as quantitative metrics in examining a patient's auditory function. However, given that these metrics can be easily affected by various human factors, which includes intentional (or accidental) patient intervention, there are needs to cross validate the accuracy of each metric. By understanding a "normal" relationship between the SDS and PTA, physicians can reveal the need for re-testing, additional testing in different dimensions, and also potential malingering cases. For this purpose, in this work, we propose a prediction model for estimating the SDS of a patient by using PTA thresholds via a Random Forest-based machine learning approach to overcome the limitations of the conventional statistical (or even manual) methods. For designing and evaluating the Random Forest-based prediction model, we collected a large-scale dataset from 12,697 subjects, and report a SDS level prediction accuracy of 95.05% and 96.64% for the left and right ears, respectively. We also present comparisons with other widely-used machine learning algorithms (e.g., Support Vector Machine, Multi-layer Perceptron) to show the effectiveness of our proposed Random Forest-based approach. Results obtained from this study provides implications and potential feasibility in providing a practically-applicable screening tool for identifying patient-intended malingering in hearing loss-related tests.


Asunto(s)
Audiometría de Tonos Puros/métodos , Aprendizaje Discriminativo , Aprendizaje Automático , Percepción del Habla , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Algoritmos , Umbral Auditivo , Niño , Preescolar , Biología Computacional , Femenino , Audición , Pérdida Auditiva/fisiopatología , Humanos , Lactante , Recién Nacido , Masculino , Persona de Mediana Edad , Modelos Estadísticos , Redes Neurales de la Computación , Reproducibilidad de los Resultados , República de Corea , Prueba del Umbral de Recepción del Habla , Adulto Joven
13.
Vet Res ; 52(1): 138, 2021 Oct 30.
Artículo en Inglés | MEDLINE | ID: mdl-34717778

RESUMEN

In this study, we investigated the role of heat shock protein 70 (HSP70) in porcine epidemic diarrhoea virus (PEDV) replication. We found that PEDV infection induced strong HSP70 overexpression in the very early stage of infection. We also confirmed that HSP70 overexpression increased the speed of PEDV replication, resulting in the generation of more virions. In contrast, knockout of HSP70 in cells significantly downregulated PEDV protein expression, resulting in a significant reduction in PEDV replication. Most importantly, we confirmed that among the structural proteins of PEDV, membrane (M) proteins have this important role. We found that membrane proteins control cellular HSP70 expression in PEDV-infected cells. We confirmed HSP70/M complex formation by both immunoprecipitation and immunofluorescence assays. Additionally, PEDV M overexpression induced strong HSP70 expression. All our results clearly confirmed that in PEDV-infected cells, the M protein plays a very important role in PEDV replication in collaboration with HSP70.


Asunto(s)
Infecciones por Coronavirus/veterinaria , Proteínas M de Coronavirus/metabolismo , Proteínas HSP70 de Choque Térmico/metabolismo , Virus de la Diarrea Epidémica Porcina/fisiología , Enfermedades de los Porcinos/virología , Replicación Viral , Animales , Infecciones por Coronavirus/virología , Biosíntesis de Proteínas , Sus scrofa , Porcinos
14.
Plants (Basel) ; 10(7)2021 Jun 24.
Artículo en Inglés | MEDLINE | ID: mdl-34202885

RESUMEN

We found the euryhaline microalga, Tetraselmis jejuensis sp. nov., which was adapted to supralittoral tide pools with salinities varying from 0.3-3.1%. Fifteen strains of T. jejuensis were isolated from Daejeong (DJ) and Yongduam (YO), and clonal cultures were established in the laboratory. Morphological characterization revealed that the cells have a compressed shape, four flagella emerging from a depression near the apex in two opposite pairs, a cup-shaped chloroplast containing one pyrenoid surrounded by starch, and eyespot regions not located near the flagellar base. T. jejuensis cells showed distinct characteristics compared to other Tetraselmis species. First, a regular subunit pattern with honeycomb-like structures was predominantly displayed on the surface in the middle of the cell body. Second, the pyrenoid was invaded by both cytoplasmic channels comprising electron-dense material separated from the cytoplasm, and two branches of small cytoplasmic channels (canaliculi) in various directions, which characterize the subgenus Tetrathele. Eyespot regions containing a large number of osmiophilic globules, packed closely together and arranged in subcircular close packing of diverse sizes, were dispersed throughout the chloroplast. In the phylogenetic analysis of small subunit (SSU) rDNA sequences, the 15 strains isolated from DJ and YO separated a newly branched clade in the Chlorodendrophyceae at the base of a clade comprising the T. carteriiformi/subcordiformis clade, T. chuii/suecica clade, and T. striata/convolutae clade. The strains in the diverging clade were considered to belong to the same species. The SSU rDNA sequences of the DJ and YO strains showed a maximum difference of 1.53% and 1.19% compared to Tetraselmis suecica (MK541745), the closest species of the family based on the phylogenetic analysis, respectively. Based on morphological, molecular, and physiological features, we suggest a new species in the genus Tetraselmis named Tetraselmis jejuensis, with the species name "jejuensis" referring to the collection site, Jeju Island, Korea.

15.
Viruses ; 13(7)2021 06 30.
Artículo en Inglés | MEDLINE | ID: mdl-34208793

RESUMEN

Highly pathogenic avian influenza (HPAI) virus is a causative agent of systemic disease in poultry, characterized by high mortality. Rapid diagnosis is crucial for the control of HPAI. In this study, we aimed to develop a differential diagnostic method that can distinguish HPAI from low pathogenic avian influenza (LPAI) viruses using dual split proteins (DSPs). DSPs are chimeras of an enzymatic split, Renilla luciferase (RL), and a non-enzymatic split green fluorescent protein (GFP). Nanoparticles expressing DSPs, sialic acid, and/or transmembrane serine protease 2 (TMPRSS2) were generated, and RL activity was determined in the presence of HPAI or LPAI pseudotyped viruses. The RL activity of nanoparticles containing both DSPs was approximately 2 × 106 RLU, indicating that DSPs can be successfully incorporated into nanoparticles. The RL activity of nanoparticles containing half of the DSPs was around 5 × 101 RLU. When nanoparticles containing half of the DSPs were incubated with HPAI pseudotyped viruses at low pH, RL activity was increased up to 1 × 103 RLU. However, LPAI pseudotyped viruses produced RL activity only in the presence of proteases (trypsin or TMPRSS2), and the average RL activity was around 7 × 102 RLU. We confirmed that nanoparticle fusion assay also diagnoses authentic viruses with specificity of 100% and sensitivity of 91.67%. The data indicated that the developed method distinguished HPAI and LPAI, and suggested that the diagnosis using DSPs could be used for the development of differential diagnostic kits for HPAI after further optimization.


Asunto(s)
Aves/virología , Virus de la Influenza A/patogenicidad , Gripe Aviar/diagnóstico , Luminiscencia , Mediciones Luminiscentes/métodos , Nanopartículas/química , Animales , Animales Salvajes/virología , Diagnóstico Diferencial , Heces/virología , Proteínas Fluorescentes Verdes/genética , Células HEK293 , Humanos , Virus de la Influenza A/aislamiento & purificación , Gripe Aviar/virología , Sensibilidad y Especificidad
16.
Mar Drugs ; 19(6)2021 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-34064031

RESUMEN

Toxic dinoflagellate Alexandrium spp. produce saxitoxins (STXs), whose biosynthesis pathway is affected by temperature. However, the link between the regulation of the relevant genes and STXs' accumulation and temperature is insufficiently understood. In the present study, we evaluated the effects of temperature on cellular STXs and the expression of two core STX biosynthesis genes (sxtA4 and sxtG) in the toxic dinoflagellate Alexandrium catenella Alex03 isolated from Korean waters. We analyzed the growth rate, toxin profiles, and gene responses in cells exposed to different temperatures, including long-term adaptation (12, 16, and 20 °C) and cold and heat stresses. Temperature significantly affected the growth of A. catenella, with optimal growth (0.49 division/day) at 16 °C and the largest cell size (30.5 µm) at 12 °C. High concentration of STXs eq were detected in cells cultured at 16 °C (86.3 fmol/cell) and exposed to cold stress at 20→12 °C (96.6 fmol/cell) compared to those at 20 °C and exposed to heat stress. Quantitative real-time PCR (qRT-PCR) revealed significant gene expression changes of sxtA4 in cells cultured at 16 °C (1.8-fold) and cold shock at 20→16 °C (9.9-fold). In addition, sxtG was significantly induced in cells exposed to cold shocks (20→16 °C; 19.5-fold) and heat stress (12→20 °C; 25.6-fold). Principal component analysis (PCA) revealed that low temperature (12 and 16 °C) and cold stress were positively related with STXs' production and gene expression levels. These results suggest that temperature may affect the toxicity and regulation of STX biosynthesis genes in dinoflagellates.


Asunto(s)
Dinoflagelados/genética , Dinoflagelados/metabolismo , Biosíntesis de Proteínas/genética , Proteínas Protozoarias/metabolismo , Saxitoxina/biosíntesis , Saxitoxina/genética , Aumento de la Célula , Proliferación Celular , Frío , Respuesta al Choque por Frío , Dinoflagelados/crecimiento & desarrollo , Regulación de la Expresión Génica , Análisis de Componente Principal , Proteínas Protozoarias/genética
17.
PLoS One ; 16(5): e0251140, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33979368

RESUMEN

This paper presents a year-long study of our project, aiming at (1) understanding the work practices of clinical staff in trauma intensive care units (TICUs) at a trauma center, with respect to their usage of clinical data interface systems, and (2) developing and evaluating an intuitive and user-centered clinical data interface system for their TICU environments. Based on a long-term field study in an urban trauma center that involved observation-, interview-, and survey-based studies to understand our target users and their working environment, we designed and implemented MediSenseView as a working prototype. MediSenseView is a clinical-data interface system, which was developed through the identification of three core challenges of existing interface system use in a trauma care unit-device separation, usage inefficiency, and system immobility-from the perspectives of three staff groups in our target environment (i.e., doctors, clinical nurses and research nurses), and through an iterative design study. The results from our pilot deployment of MediSenseView and a user study performed with 28 trauma center staff members highlight their work efficiency and satisfaction with MediSenseView compared to existing clinical data interface systems in the hospital.


Asunto(s)
Medicina Clínica/métodos , Centros Traumatológicos/tendencias , Interfaz Usuario-Computador , Toma de Decisiones Asistida por Computador , Eficiencia , Personal de Salud/psicología , Humanos , Unidades de Cuidados Intensivos/tendencias , Programas Informáticos , Participación de los Interesados , Encuestas y Cuestionarios
18.
Front Vet Sci ; 8: 802816, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-35372525

RESUMEN

Because the porcine epidemic diarrhea virus (PEDV) is a critical pathogen resulting in rapid spreading and high mortality rates in piglets, understanding of the transmission route of PEDV is required for its controlling. Until now, it is well known that PEDV transmission routes are various, such as fecal-oral route, contaminated feed, farmworkers, and transport vehicles. However, unlike several swine-infected viruses, there were no reports of vertical transmission with PEDV. In our study, we confirmed possible vertical transmission of PEDV. We confirmed PEDV in piglet testicles and umbilical cords from PEDV-positive sow. These findings are direct evidence that PEDV is transmitted vertically through placenta. This is the first report on transplacental transmission of PEDV and will be very important information for controlling PED.

19.
Materials (Basel) ; 12(10)2019 May 16.
Artículo en Inglés | MEDLINE | ID: mdl-31100956

RESUMEN

In recent years, nano-reinforcing technologies for cementitious materials have attracted considerable interest as a viable solution for compensating the poor cracking resistance of these materials. In this study, for the first time, titanium nanotubes (TNTs) were incorporated in cement pastes and their effect on the mechanical properties, microstructure, and early-age hydration kinetics was investigated. Experimental results showed that both compressive (~12%) and flexural strength (~23%) were enhanced with the addition of 0.5 wt.% of TNTs relative to plain cement paste at 28 days of curing. Moreover, it was found that, while TNTs accelerated the hydration kinetics of the pure cement clinker phase (C3S) in the early age of the reaction (within 24 h), there was no significant effect from adding TNTs on the hydration of ordinary Portland cement. TNTs appeared to compress the microstructure by filling the cement paste pore of sizes ranging from 10 to 100 nm. Furthermore, it could be clearly observed that the TNTs bridged the microcracks of cement paste. These results suggested that TNTs could be a great potential candidate since nano-reinforcing agents complement the shortcomings of cementitious materials.

20.
Vet Microbiol ; 221: 19-26, 2018 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-29981703

RESUMEN

Porcine epidemic diarrhea virus (PEDV) infects pigs and causes an enteric disease that is characterized by vomiting and watery diarrhea. PEDV outbreaks have a tremendous financial impact on the worldwide pork industry. In South Korea, the incidence of PEDV has continued despite nationwide use of attenuated and inactivated vaccines, raising questions regarding the current vaccines' efficacy and the need for new vaccine development. In the present study, we isolated a new Korean PEDV epidemic strain, PED-CUP-B2014, in Vero cells. Phylogenetic analysis of the spike gene demonstrated that the PED-CUP-B2014 belongs in genogroup G2b and is close to PEDVs currently circulating in many countries including the United States, and is distinct from many current vaccine strains. Upon serial passages into Vero cells, PED-CUP-B2014 adapted to Vero cells, which was evidenced as higher virus growth in Vero cells and confirmed lower virulence in suckling piglets. The administration of the inactivated 65-passaged PED-CUP-B2014 to sows greatly increased the survival rate of their offspring and significantly reduced diarrhea severity after PEDV challenge. Higher serum/colostrum PEDV-specific antibodies and higher neutralizing titers were shown in sows vaccinated with PED-CUP-B2014 compared to unvaccinated sows or sows administered commercial PEDV vaccine. Altogether, our data demonstrated that the newly isolated PEDV strain conferred critical passive immune protection to pigs against epidemic PEDV infection.


Asunto(s)
Infecciones por Coronavirus/veterinaria , Virus de la Diarrea Epidémica Porcina/genética , Enfermedades de los Porcinos/virología , Vacunas Virales/inmunología , Animales , Chlorocebus aethiops , Infecciones por Coronavirus/inmunología , Infecciones por Coronavirus/virología , Filogenia , Virus de la Diarrea Epidémica Porcina/inmunología , República de Corea/epidemiología , Porcinos , Enfermedades de los Porcinos/epidemiología , Enfermedades de los Porcinos/prevención & control , Células Vero
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